Uses of Class
org.forester.go.PfamToGoMapping
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Packages that use PfamToGoMapping Package Description org.forester.go org.forester.go.etc org.forester.surfacing -
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Uses of PfamToGoMapping in org.forester.go
Methods in org.forester.go that return types with arguments of type PfamToGoMapping Modifier and Type Method Description java.util.List<PfamToGoMapping>
PfamToGoParser. parse()
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Uses of PfamToGoMapping in org.forester.go.etc
Method parameters in org.forester.go.etc with type arguments of type PfamToGoMapping Modifier and Type Method Description static void
MetaOntologizer. reformat(java.io.File ontologizer_outdir, java.lang.String result_file_prefix, java.io.File domain_gain_loss_file, java.lang.String outfile_base, java.io.File obo_file, double p_adjusted_upper_limit, java.lang.String comment, java.util.List<PfamToGoMapping> pfam_to_go)
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Uses of PfamToGoMapping in org.forester.surfacing
Method parameters in org.forester.surfacing with type arguments of type PfamToGoMapping Modifier and Type Method Description static java.util.Map<java.lang.String,java.util.List<GoId>>
SurfacingUtil. createDomainIdToGoIdMap(java.util.List<PfamToGoMapping> pfam_to_go_mappings)
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