Uses of Class
org.forester.protein.BinaryDomainCombination.OutputFormat
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Packages that use BinaryDomainCombination.OutputFormat Package Description org.forester.protein org.forester.surfacing -
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Uses of BinaryDomainCombination.OutputFormat in org.forester.protein
Methods in org.forester.protein that return BinaryDomainCombination.OutputFormat Modifier and Type Method Description static BinaryDomainCombination.OutputFormat
BinaryDomainCombination.OutputFormat. valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.static BinaryDomainCombination.OutputFormat[]
BinaryDomainCombination.OutputFormat. values()
Returns an array containing the constants of this enum type, in the order they are declared.Methods in org.forester.protein with parameters of type BinaryDomainCombination.OutputFormat Modifier and Type Method Description java.lang.StringBuffer
BinaryDomainCombination. toGraphDescribingLanguage(BinaryDomainCombination.OutputFormat format, java.lang.String node_attribute, java.lang.String edge_attribute)
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Uses of BinaryDomainCombination.OutputFormat in org.forester.surfacing
Methods in org.forester.surfacing with parameters of type BinaryDomainCombination.OutputFormat Modifier and Type Method Description java.lang.StringBuffer
BasicBinaryDomainCombination. toGraphDescribingLanguage(BinaryDomainCombination.OutputFormat format, java.lang.String node_attribute, java.lang.String edge_attribute)
static void
SurfacingUtil. writeBinaryStatesMatrixAsListToFileForBinaryCombinationsForGraphAnalysis(CharacterStateMatrix<CharacterStateMatrix.GainLossStates> matrix, CharacterStateMatrix.GainLossStates state, java.lang.String filename, java.lang.String indentifier_characters_separator, java.lang.String character_separator, BinaryDomainCombination.OutputFormat bc_output_format)
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