Class BlastResult

  • All Implemented Interfaces:
    java.lang.Iterable<Hit>

    public class BlastResult
    extends Result
    This class models a Blast/Blast plus result. You will find one of this for every query sequence specified in the run. Designed by Paolo Pavan. You may want to find my contacts on Github and LinkedIn for code info or discuss major changes. https://github.com/paolopavan
    Author:
    Paolo Pavan
    • Constructor Detail

      • BlastResult

        public BlastResult​(java.lang.String program,
                           java.lang.String version,
                           java.lang.String reference,
                           java.lang.String dbFile,
                           java.util.HashMap<java.lang.String,​java.lang.String> programSpecificParameters,
                           int iterationNumber,
                           java.lang.String queryID,
                           java.lang.String queryDef,
                           int queryLength,
                           java.util.List<Hit> hits,
                           Sequence querySequence)